Jaedong Hwang, Kathleen Zhang, Wei Dai +5 more
Foundation models for EEG aim to learn once from a large corpus of recordings and then transfer to many different clinical and brain-computer interface tasks with a single backbone. The dominant recipe borrows from language modelling: chop the continuous signal into patches or codebook tokens, then train a transformer with masked self-supervision.
The authors object to the first step. Brain activity is continuous rhythm, and slicing it into discrete tokens fragments those rhythms and blurs the fine-grained temporal detail that carries the information. It is a bit like transcribing music by writing down which note is playing every half second: you keep something, and you lose the phrasing that made it music.
Their alternative uses flow matching with a SplitUNet architecture, staying closer to the continuous nature of the waveform rather than forcing it through a vocabulary. Whether it wins on benchmarks is one question, but the critique itself is worth sitting with, because the tokenisation habit was inherited from text rather than chosen for brains.
EEG foundation models can learn generalizable representations from large-scale EEG corpora to enable single-backbone transfer across diverse clinical and brain-computer interface tasks. Existing models typically discretize the continuous multi-channel EEG waveform into patches or codebook tokens and train a transformer with masked self-supervision. Recognizing that this discretization fragments continuous brain rhythms and obscures fine-grained temporal dynamics, we present…
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